DFL_008545 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DFL_008545

DLH domain-containing protein. (269 aa)

Predicted Functional Partners:

DFL_000192

0.891

DFL_009504

0.693

DFL_007818

0.693

DFL_004506

0.693

DFL_007155

0.662

DFL_004270

0.644

DFL_005308

0.606

TIF34

0.586

DFL_007731

0.586

DFL_006908

0.575

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_000192	DFL_008545	A0A437AD83	A0A436ZP26	Uncharacterized protein.	DLH domain-containing protein.	0.891
DFL_004270	DFL_008545	A0A437A464	A0A436ZP26	Uncharacterized protein.	DLH domain-containing protein.	0.644
DFL_004506	DFL_008545	A0A437A502	A0A436ZP26	C2H2-type domain-containing protein.	DLH domain-containing protein.	0.693
DFL_005308	DFL_007155	A0A437A818	A0A436ZUZ2	Uncharacterized protein.	ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ATP, which is converted to ADP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Belongs to the NnrD/CARKD family.	0.518
DFL_005308	DFL_007731	A0A437A818	A0A436ZWR9	Uncharacterized protein.	PUM-HD domain-containing protein.	0.534
DFL_005308	DFL_008545	A0A437A818	A0A436ZP26	Uncharacterized protein.	DLH domain-containing protein.	0.606
DFL_005308	TIF34	A0A437A818	A0A436ZRM5	Uncharacterized protein.	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.633
DFL_006908	DFL_008545	A0A436ZUF9	A0A436ZP26	DLH domain-containing protein.	DLH domain-containing protein.	0.575
DFL_007155	DFL_005308	A0A436ZUZ2	A0A437A818	ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ATP, which is converted to ADP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Belongs to the NnrD/CARKD family.	Uncharacterized protein.	0.518
DFL_007155	DFL_008545	A0A436ZUZ2	A0A436ZP26	ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ATP, which is converted to ADP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Belongs to the NnrD/CARKD family.	DLH domain-containing protein.	0.662
DFL_007731	DFL_005308	A0A436ZWR9	A0A437A818	PUM-HD domain-containing protein.	Uncharacterized protein.	0.534
DFL_007731	DFL_008545	A0A436ZWR9	A0A436ZP26	PUM-HD domain-containing protein.	DLH domain-containing protein.	0.586
DFL_007731	TIF34	A0A436ZWR9	A0A436ZRM5	PUM-HD domain-containing protein.	Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.	0.586
DFL_007818	DFL_008545	A0A436ZXA4	A0A436ZP26	DLH domain-containing protein.	DLH domain-containing protein.	0.693
DFL_008545	DFL_000192	A0A436ZP26	A0A437AD83	DLH domain-containing protein.	Uncharacterized protein.	0.891
DFL_008545	DFL_004270	A0A436ZP26	A0A437A464	DLH domain-containing protein.	Uncharacterized protein.	0.644
DFL_008545	DFL_004506	A0A436ZP26	A0A437A502	DLH domain-containing protein.	C2H2-type domain-containing protein.	0.693
DFL_008545	DFL_005308	A0A436ZP26	A0A437A818	DLH domain-containing protein.	Uncharacterized protein.	0.606
DFL_008545	DFL_006908	A0A436ZP26	A0A436ZUF9	DLH domain-containing protein.	DLH domain-containing protein.	0.575
DFL_008545	DFL_007155	A0A436ZP26	A0A436ZUZ2	DLH domain-containing protein.	ATP-dependent (S)-NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ATP, which is converted to ADP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Belongs to the NnrD/CARKD family.	0.662