Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008538Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
DFL_003975
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 0.981
DFL_002211
PALP domain-containing protein.
  
 0.980
DFL_004683
FAD-binding FR-type domain-containing protein.
   
 
 0.979
DFL_000299
Uncharacterized protein.
  
 
 0.978
DFL_007222
PALP domain-containing protein.
  
 0.977
DFL_009564
Uncharacterized protein.
   
 0.965
DFL_001474
Hcy-binding domain-containing protein.
  
 
 0.959
DFL_005869
Flavodoxin-like domain-containing protein.
  
 
 0.940
DFL_006435
AB hydrolase-1 domain-containing protein.
 
 
 
 0.916
DFL_005067
Uncharacterized protein.
  
 
0.909
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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