STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008549PUM-HD domain-containing protein. (1074 aa)    
Predicted Functional Partners:
DFL_001282
Uncharacterized protein.
    
 
 0.717
DFL_009652
SKIP_SNW domain-containing protein.
    
  0.635
DFL_006055
PUM-HD domain-containing protein.
    
 
0.634
DFL_008547
AAA_16 domain-containing protein.
 
      0.631
DFL_009565
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.601
DFL_006110
Uncharacterized protein.
    
  0.600
DFL_003565
RRM domain-containing protein.
     
 0.590
DFL_001932
Endo/exonuclease/phosphatase domain-containing protein.
    
 
 0.572
DFL_005504
RNB domain-containing protein.
   
   0.539
DFL_005065
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.533
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.