DFL_008549 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DFL_008549

PUM-HD domain-containing protein. (1074 aa)

Predicted Functional Partners:

DFL_009565

0.928

DFL_001932

0.903

DFL_001282

0.902

DFL_005504

0.880

DFL_006055

0.862

DFL_007071

0.822

DFL_007527

0.810

DFL_002194

0.788

DFL_009850

0.697

DFL_009031

0.667

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_001282	DFL_001932	A0A437AGW4	A0A437A9D8	Uncharacterized protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.994
DFL_001282	DFL_002194	A0A437AGW4	A0A437A9T3	Uncharacterized protein.	Uncharacterized protein.	0.614
DFL_001282	DFL_007071	A0A437AGW4	A0A436ZV83	Uncharacterized protein.	Uncharacterized protein.	0.560
DFL_001282	DFL_008549	A0A437AGW4	A0A436ZP38	Uncharacterized protein.	PUM-HD domain-containing protein.	0.902
DFL_001282	DFL_009565	A0A437AGW4	A0A436ZS57	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.984
DFL_001932	DFL_001282	A0A437A9D8	A0A437AGW4	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.994
DFL_001932	DFL_005504	A0A437A9D8	A0A436ZYB8	Endo/exonuclease/phosphatase domain-containing protein.	RNB domain-containing protein.	0.821
DFL_001932	DFL_007071	A0A437A9D8	A0A436ZV83	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein.	0.881
DFL_001932	DFL_008549	A0A437A9D8	A0A436ZP38	Endo/exonuclease/phosphatase domain-containing protein.	PUM-HD domain-containing protein.	0.903
DFL_001932	DFL_009565	A0A437A9D8	A0A436ZS57	Endo/exonuclease/phosphatase domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.990
DFL_002194	DFL_001282	A0A437A9T3	A0A437AGW4	Uncharacterized protein.	Uncharacterized protein.	0.614
DFL_002194	DFL_008549	A0A437A9T3	A0A436ZP38	Uncharacterized protein.	PUM-HD domain-containing protein.	0.788
DFL_002194	DFL_009031	A0A437A9T3	A0A436ZQR4	Uncharacterized protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.585
DFL_005504	DFL_001932	A0A436ZYB8	A0A437A9D8	RNB domain-containing protein.	Endo/exonuclease/phosphatase domain-containing protein.	0.821
DFL_005504	DFL_008549	A0A436ZYB8	A0A436ZP38	RNB domain-containing protein.	PUM-HD domain-containing protein.	0.880
DFL_005504	DFL_009565	A0A436ZYB8	A0A436ZS57	RNB domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.853
DFL_006055	DFL_008549	A0A437A031	A0A436ZP38	PUM-HD domain-containing protein.	PUM-HD domain-containing protein.	0.862
DFL_006055	DFL_009565	A0A437A031	A0A436ZS57	PUM-HD domain-containing protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.673
DFL_006055	DFL_009850	A0A437A031	A0A436ZTD8	PUM-HD domain-containing protein.	Uncharacterized protein.	0.475
DFL_007071	DFL_001282	A0A436ZV83	A0A437AGW4	Uncharacterized protein.	Uncharacterized protein.	0.560