Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008559Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
DFL_004756
WD_REPEATS_REGION domain-containing protein.
   
 0.892
DFL_002387
Uncharacterized protein.
   
 0.858
DFL_004262
Uncharacterized protein.
    
 0.846
DFL_009538
Uncharacterized protein.
   
 0.840
DFL_001972
G protein gamma domain-containing protein.
   
 0.827
DFL_008560
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
 
      0.725
DFL_004164
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
 0.715
DFL_001980
Phosphodiesterase.
    
 0.675
DFL_002547
Uncharacterized protein.
    
 
 0.636
DFL_007781
Uncharacterized protein.
    
 0.618
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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