STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008573Uncharacterized protein. (215 aa)    
Predicted Functional Partners:
DFL_007649
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.974
DFL_007465
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.969
DFL_007689
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.958
DFL_001937
Uncharacterized protein.
  
 
 0.938
DFL_005079
Uncharacterized protein.
   
 0.936
DFL_000373
Amine oxidase.
   
 0.936
DFL_000177
Uncharacterized protein.
   
 0.933
DFL_000347
Uncharacterized protein.
   
 0.933
DFL_006703
WD_REPEATS_REGION domain-containing protein.
   
 0.927
DFL_003065
Uncharacterized protein.
   
 0.927
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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