Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008487NB-ARC domain-containing protein. (1323 aa)    
Predicted Functional Partners:
DFL_008439
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.767
DFL_006687
Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.714
DFL_003981
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.633
DFL_000956
Uncharacterized protein.
   
 0.587
DFL_006226
Uncharacterized protein.
    
   0.559
DFL_006240
Uncharacterized protein; Belongs to the complex I LYR family.
    
   0.559
DFL_008302
zf-CHCC domain-containing protein.
    
   0.552
DFL_008738
Epimerase domain-containing protein.
    
   0.552
DFL_008835
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
    
   0.552
DFL_009529
Uncharacterized protein.
    
   0.552
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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