DFL_008581 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DFL_008581

Uncharacterized protein. (282 aa)

Predicted Functional Partners:

DFL_000267

0.681

DFL_006965

0.638

DFL_005906

0.623

DFL_008148

0.611

DFL_008155

0.611

DFL_008173

0.611

DFL_008426

0.611

DFL_008592

0.611

DFL_008606

0.611

DFL_008825

0.611

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_000267	DFL_005906	A0A437ADT9	A0A436ZYP7	KOW domain-containing protein.	Uncharacterized protein.	0.611
DFL_000267	DFL_006965	A0A437ADT9	A0A436ZUW5	KOW domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.611
DFL_000267	DFL_008148	A0A437ADT9	A0A436ZMW6	KOW domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.611
DFL_000267	DFL_008155	A0A437ADT9	A0A436ZMY8	KOW domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.611
DFL_000267	DFL_008173	A0A437ADT9	A0A436ZN52	KOW domain-containing protein.	37S ribosomal protein S25, mitochondrial.	0.611
DFL_000267	DFL_008426	A0A437ADT9	A0A436ZNR5	KOW domain-containing protein.	Uncharacterized protein.	0.611
DFL_000267	DFL_008581	A0A437ADT9	A0A436ZP59	KOW domain-containing protein.	Uncharacterized protein.	0.681
DFL_000267	DFL_008592	A0A437ADT9	A0A436ZP66	KOW domain-containing protein.	Uncharacterized protein.	0.611
DFL_000267	DFL_008606	A0A437ADT9	A0A436ZPI5	KOW domain-containing protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.611
DFL_000267	DFL_008825	A0A437ADT9	A0A436ZPW5	KOW domain-containing protein.	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation.	0.611
DFL_005906	DFL_000267	A0A436ZYP7	A0A437ADT9	Uncharacterized protein.	KOW domain-containing protein.	0.611
DFL_005906	DFL_006965	A0A436ZYP7	A0A436ZUW5	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.982
DFL_005906	DFL_008148	A0A436ZYP7	A0A436ZMW6	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.905
DFL_005906	DFL_008155	A0A436ZYP7	A0A436ZMY8	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.989
DFL_005906	DFL_008173	A0A436ZYP7	A0A436ZN52	Uncharacterized protein.	37S ribosomal protein S25, mitochondrial.	0.927
DFL_005906	DFL_008426	A0A436ZYP7	A0A436ZNR5	Uncharacterized protein.	Uncharacterized protein.	0.982
DFL_005906	DFL_008581	A0A436ZYP7	A0A436ZP59	Uncharacterized protein.	Uncharacterized protein.	0.623
DFL_005906	DFL_008592	A0A436ZYP7	A0A436ZP66	Uncharacterized protein.	Uncharacterized protein.	0.959
DFL_005906	DFL_008606	A0A436ZYP7	A0A436ZPI5	Uncharacterized protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.897
DFL_005906	DFL_008825	A0A436ZYP7	A0A436ZPW5	Uncharacterized protein.	37S ribosomal protein mrp10, mitochondrial; Involved in mitochondrial genome encoded proteins translation.	0.920