STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008527USP domain-containing protein. (425 aa)    
Predicted Functional Partners:
DFL_002341
Uncharacterized protein.
     
 0.595
DFL_000903
Uncharacterized protein.
    
  0.588
DFL_003353
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.585
DFL_004269
Rhodanese domain-containing protein.
    
  0.571
DFL_007237
Uncharacterized protein.
     
  0.438
DFL_009649
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 0.424
DFL_003462
Rhodanese domain-containing protein.
    
  0.411
DFL_001540
Uncharacterized protein.
    
  0.411
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.