Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008496Cysteine dioxygenase. (227 aa)    
Predicted Functional Partners:
DFL_009016
Uncharacterized protein.
     
 0.944
DFL_009528
Uncharacterized protein.
     
 0.937
DFL_008241
Uncharacterized protein.
     
 0.931
DFL_007138
Uncharacterized protein.
     
 0.931
DFL_003975
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
 0.906
DFL_008538
Uncharacterized protein.
     
 0.904
DFL_007222
PALP domain-containing protein.
   
 
 0.892
DFL_002211
PALP domain-containing protein.
   
 
 0.892
DFL_006206
Aldo_ket_red domain-containing protein.
   
 
 0.883
DFL_008037
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
     
 0.877
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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