Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_008773F-box domain-containing protein. (469 aa)    
Predicted Functional Partners:
DFL_005140
Uncharacterized protein.
    
 0.800
DFL_005173
Uncharacterized protein.
    
 0.792
DFL_008209
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 0.787
DFL_005054
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.787
DFL_005364
Hist_deacetyl domain-containing protein.
    
 0.787
DFL_008327
TAF domain-containing protein.
    
 0.778
DFL_009579
TFIID_20kDa domain-containing protein.
    
 0.778
DFL_006720
Uncharacterized protein.
    
 0.777
DFL_003987
SCA7 domain-containing protein.
    
 0.777
DFL_002998
Uncharacterized protein.
    
 0.777
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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