Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_009063Uncharacterized protein. (1616 aa)    
Predicted Functional Partners:
DFL_002975
WD_REPEATS_REGION domain-containing protein.
   
 0.995
DFL_003934
Uncharacterized protein.
   
 0.994
DFL_005577
Uncharacterized protein.
   
 0.993
DFL_005705
RNase_PH domain-containing protein.
   
 0.993
DFL_003589
Uncharacterized protein.
   
 
 0.993
DFL_006863
zf-C3H1 domain-containing protein.
    
 0.992
DFL_006828
RNase_PH domain-containing protein.
   
 0.991
DFL_005264
RNase_PH domain-containing protein.
   
 0.991
DFL_002691
Uncharacterized protein.
   
 0.991
DFL_002771
Uncharacterized protein.
   
 0.991
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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