STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_009098LsmAD domain-containing protein. (1094 aa)    
Predicted Functional Partners:
DFL_004303
AD domain-containing protein.
  
 
 0.997
DFL_004973
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.948
DFL_009565
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.943
DFL_005023
Uncharacterized protein.
    
 
 0.911
DFL_009046
Sm domain-containing protein.
    
 
 0.879
DFL_004574
Sm domain-containing protein.
    
 
 0.879
DFL_008610
Uncharacterized protein.
    
 
 0.679
DFL_004830
Uncharacterized protein.
    
 
 0.626
DFL_001944
Uncharacterized protein.
   
 
 0.626
DFL_009630
5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins.
    
 
 0.601
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.