STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_009807Uncharacterized protein. (399 aa)    
Predicted Functional Partners:
DFL_009806
tRNA-synt_1 domain-containing protein.
 
     0.950
DFL_002332
Uncharacterized protein.
   
 0.880
DFL_006625
Uncharacterized protein.
   
 0.752
DFL_003517
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
0.736
DFL_004596
Uncharacterized protein.
  
0.733
DFL_004523
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 0.719
DFL_007659
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.709
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.635
DFL_002207
TPR_REGION domain-containing protein.
  
  
 0.612
DFL_004649
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.588
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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