STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_006684Cyclin N-terminal domain-containing protein. (302 aa)    
Predicted Functional Partners:
DFL_009671
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.802
DFL_009670
Uncharacterized protein.
    
 0.802
DFL_007753
Protein kinase domain-containing protein.
    
 0.802
DFL_004489
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.738
DFL_001478
MARVEL domain-containing protein.
    
 0.738
DFL_007219
Uncharacterized protein.
    
 0.727
DFL_001252
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.723
DFL_007715
Uncharacterized protein.
    
 0.690
DFL_001332
CYCLIN domain-containing protein; Belongs to the cyclin family.
     
 0.676
DFL_002442
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
     
 0.675
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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