Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_006796Helo_like_N domain-containing protein. (407 aa)    
Predicted Functional Partners:
DFL_008607
WD_REPEATS_REGION domain-containing protein.
    
 0.936
DFL_003590
B30.2/SPRY domain-containing protein.
   
 0.929
DFL_005187
WD_REPEATS_REGION domain-containing protein.
    
 0.929
DFL_002971
Uncharacterized protein.
    
 0.901
DFL_009010
Uncharacterized protein.
    
 0.792
DFL_000815
PH domain-containing protein.
    
 0.792
DFL_000872
Uncharacterized protein.
    
 
 0.625
DFL_000931
SWIB domain-containing protein.
    
 
 0.571
DFL_007716
Histone domain-containing protein.
    
 0.569
DFL_003401
Fe2OG dioxygenase domain-containing protein.
    
 0.569
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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