Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_006841bVLRF1 domain-containing protein. (633 aa)    
Predicted Functional Partners:
DFL_004312
Uncharacterized protein.
   
 0.981
DFL_008332
AAA domain-containing protein.
   
 0.944
DFL_004838
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.944
DFL_008168
U-box domain-containing protein.
    
 
 0.903
DFL_003664
Uncharacterized protein.
   
 0.874
DFL_009225
MPN domain-containing protein.
    
 0.867
DFL_003522
RING-type domain-containing protein.
    
 0.850
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
   0.842
DFL_000318
Uncharacterized protein.
   
 0.803
DFL_009188
Uncharacterized protein.
 
      0.797
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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