DFL_006841 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DFL_006841

bVLRF1 domain-containing protein. (633 aa)

Predicted Functional Partners:

DFL_009188

0.798

TIF6

0.788

DFL_008332

0.769

DFL_004838

0.769

DFL_003664

0.759

DFL_004312

0.655

DFL_008168

0.642

DFL_006781

0.569

DFL_000318

0.564

DFL_008542

0.559

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_000318	DFL_003664	A0A437ADE5	A0A437A2N1	Uncharacterized protein.	Uncharacterized protein.	0.535
DFL_000318	DFL_004312	A0A437ADE5	A0A437A4H0	Uncharacterized protein.	Uncharacterized protein.	0.706
DFL_000318	DFL_004838	A0A437ADE5	A0A437A6B9	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.620
DFL_000318	DFL_006841	A0A437ADE5	A0A436ZTY3	Uncharacterized protein.	bVLRF1 domain-containing protein.	0.564
DFL_000318	DFL_008332	A0A437ADE5	A0A436ZNJ3	Uncharacterized protein.	AAA domain-containing protein.	0.620
DFL_003664	DFL_000318	A0A437A2N1	A0A437ADE5	Uncharacterized protein.	Uncharacterized protein.	0.535
DFL_003664	DFL_004312	A0A437A2N1	A0A437A4H0	Uncharacterized protein.	Uncharacterized protein.	0.441
DFL_003664	DFL_006781	A0A437A2N1	A0A436ZUB6	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.562
DFL_003664	DFL_006841	A0A437A2N1	A0A436ZTY3	Uncharacterized protein.	bVLRF1 domain-containing protein.	0.759
DFL_003664	DFL_008168	A0A437A2N1	A0A436ZMY3	Uncharacterized protein.	U-box domain-containing protein.	0.839
DFL_003664	DFL_008542	A0A437A2N1	A0A436ZP19	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.680
DFL_003664	TIF6	A0A437A2N1	A0A437AGM3	Uncharacterized protein.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.	0.680
DFL_004312	DFL_000318	A0A437A4H0	A0A437ADE5	Uncharacterized protein.	Uncharacterized protein.	0.706
DFL_004312	DFL_003664	A0A437A4H0	A0A437A2N1	Uncharacterized protein.	Uncharacterized protein.	0.441
DFL_004312	DFL_004838	A0A437A4H0	A0A437A6B9	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.550
DFL_004312	DFL_006781	A0A437A4H0	A0A436ZUB6	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.750
DFL_004312	DFL_006841	A0A437A4H0	A0A436ZTY3	Uncharacterized protein.	bVLRF1 domain-containing protein.	0.655
DFL_004312	DFL_008332	A0A437A4H0	A0A436ZNJ3	Uncharacterized protein.	AAA domain-containing protein.	0.550
DFL_004312	DFL_008542	A0A437A4H0	A0A436ZP19	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.600
DFL_004838	DFL_000318	A0A437A6B9	A0A437ADE5	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.620