DFL_006846 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

DFL_006846

Uncharacterized protein. (134 aa)

Predicted Functional Partners:

DFL_006216

0.999

DFL_006121

0.999

DFL_006251

0.999

DFL_004825

0.999

DFL_002331

0.999

DFL_001081

0.999

DFL_008911

0.998

DFL_005828

0.998

DFL_003292

0.998

DFL_002321

0.998

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_001081	DFL_002321	A0A437AG48	A0A437AA41	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.998
DFL_001081	DFL_002331	A0A437AG48	A0A437AA49	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
DFL_001081	DFL_003292	A0A437AG48	A0A437A1F3	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.998
DFL_001081	DFL_004825	A0A437AG48	A0A437A631	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_001081	DFL_005828	A0A437AG48	A0A436ZYY8	Uncharacterized protein.	Ribosomal_S7 domain-containing protein.	0.998
DFL_001081	DFL_006121	A0A437AG48	A0A436ZZU7	Uncharacterized protein.	Uncharacterized protein.	0.998
DFL_001081	DFL_006216	A0A437AG48	A0A436ZZN0	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.998
DFL_001081	DFL_006251	A0A437AG48	A0A437A0H3	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_001081	DFL_006846	A0A437AG48	A0A436ZU07	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_001081	DFL_008911	A0A437AG48	A0A436ZQB7	Uncharacterized protein.	Uncharacterized protein.	0.993
DFL_002321	DFL_001081	A0A437AA41	A0A437AG48	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.998
DFL_002321	DFL_002331	A0A437AA41	A0A437AA49	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.998
DFL_002321	DFL_003292	A0A437AA41	A0A437A1F3	Ribosomal_S10 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.	0.995
DFL_002321	DFL_004825	A0A437AA41	A0A437A631	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.996
DFL_002321	DFL_005828	A0A437AA41	A0A436ZYY8	Ribosomal_S10 domain-containing protein.	Ribosomal_S7 domain-containing protein.	0.994
DFL_002321	DFL_006121	A0A437AA41	A0A436ZZU7	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.998
DFL_002321	DFL_006216	A0A437AA41	A0A436ZZN0	Ribosomal_S10 domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.997
DFL_002321	DFL_006251	A0A437AA41	A0A437A0H3	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.998
DFL_002321	DFL_006846	A0A437AA41	A0A436ZU07	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.998
DFL_002321	DFL_008911	A0A437AA41	A0A436ZQB7	Ribosomal_S10 domain-containing protein.	Uncharacterized protein.	0.997