Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DFL_007443Peptide hydrolase; Belongs to the peptidase M28 family. (394 aa)    
Predicted Functional Partners:
DFL_002723
Uncharacterized protein.
 
      0.733
DFL_004927
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
    
   0.640
DFL_009212
Peptidase_S9 domain-containing protein.
      
 0.567
DFL_001762
Uncharacterized protein.
    
   0.559
DFL_004364
FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
   
 0.487
DFL_008368
PhoD_N domain-containing protein.
    
  0.468
DFL_009085
E3 ubiquitin-protein ligase.
    
  0.468
DFL_007257
Uncharacterized protein.
    
  0.468
DFL_005653
PhoD_N domain-containing protein.
    
  0.468
DFL_004150
Uncharacterized protein.
    
  0.468
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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