STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_007815Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (454 aa)    
Predicted Functional Partners:
DFL_006949
Uncharacterized protein.
    
 0.885
DFL_005706
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 0.867
DFL_001047
Semialdhyde_dh domain-containing protein.
  
 
 0.857
DFL_006315
Arginase; Belongs to the arginase family.
  
 
 0.804
DFL_003912
Uncharacterized protein; Belongs to the arginase family.
  
 
 0.802
DFL_007302
Homoserine dehydrogenase.
  
 
 0.801
DFL_002753
Aspartokinase.
    
 0.793
DFL_000005
Uncharacterized protein.
    
 0.777
DFL_002206
Uncharacterized protein.
     
 0.768
DFL_000813
Uncharacterized protein.
    
  0.757
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.