Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_007930HMG box domain-containing protein. (508 aa)    
Predicted Functional Partners:
DFL_003609
YL1_C domain-containing protein.
    
 0.784
DFL_001815
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
 0.784
DFL_008663
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
    
 0.781
DFL_003639
Uncharacterized protein; Belongs to the actin family.
    
 0.776
DFL_000188
Uncharacterized protein.
   
 0.776
DFL_006806
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.773
DFL_002596
Histone H2A; Belongs to the histone H2A family.
   
 0.762
DFL_001283
Uncharacterized protein.
    
 0.762
DFL_002910
Uncharacterized protein; Belongs to the actin family.
   
 0.758
DFL_000204
Histone H2A; Belongs to the histone H2A family.
   
 0.746
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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