Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_007955ZnMc domain-containing protein. (234 aa)    
Predicted Functional Partners:
DFL_007253
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
    
 0.488
DFL_004222
Zn_dep_PLPC domain-containing protein.
    
 0.474
DFL_003278
Uncharacterized protein.
    
 0.470
DFL_009076
Uncharacterized protein.
    
 0.460
DFL_008319
Uncharacterized protein.
    
 0.434
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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