DFL_007959 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DFL_007959

Uncharacterized protein. (457 aa)

Predicted Functional Partners:

DFL_001122

0.898

DFL_002353

0.604

DFL_003650

0.588

DFL_002861

0.556

DFL_004740

0.538

DFL_000477

0.448

DFL_002288

0.447

TSR3

0.437

DFL_004643

0.435

DFL_007427

0.418

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_000477	DFL_001122	A0A437AFC1	A0A437AG89	Uncharacterized protein.	Uncharacterized protein.	0.448
DFL_000477	DFL_002353	A0A437AFC1	A0A437AAN0	Uncharacterized protein.	Uncharacterized protein.	0.611
DFL_000477	DFL_003650	A0A437AFC1	A0A437A2F4	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.	0.475
DFL_000477	DFL_004643	A0A437AFC1	A0A437A5K0	Uncharacterized protein.	DUF2428 domain-containing protein.	0.504
DFL_000477	DFL_007427	A0A437AFC1	A0A436ZWH1	Uncharacterized protein.	Uncharacterized protein.	0.959
DFL_000477	DFL_007959	A0A437AFC1	A0A436ZXW3	Uncharacterized protein.	Uncharacterized protein.	0.448
DFL_001122	DFL_000477	A0A437AG89	A0A437AFC1	Uncharacterized protein.	Uncharacterized protein.	0.448
DFL_001122	DFL_002861	A0A437AG89	A0A437ABP5	Uncharacterized protein.	Uncharacterized protein.	0.436
DFL_001122	DFL_003650	A0A437AG89	A0A437A2F4	Uncharacterized protein.	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.	0.471
DFL_001122	DFL_004740	A0A437AG89	A0A437A5U8	Uncharacterized protein.	HECT domain-containing protein.	0.538
DFL_001122	DFL_007427	A0A437AG89	A0A436ZWH1	Uncharacterized protein.	Uncharacterized protein.	0.406
DFL_001122	DFL_007959	A0A437AG89	A0A436ZXW3	Uncharacterized protein.	Uncharacterized protein.	0.898
DFL_002288	DFL_007959	A0A437AB30	A0A436ZXW3	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein.	0.447
DFL_002353	DFL_000477	A0A437AAN0	A0A437AFC1	Uncharacterized protein.	Uncharacterized protein.	0.611
DFL_002353	DFL_002861	A0A437AAN0	A0A437ABP5	Uncharacterized protein.	Uncharacterized protein.	0.949
DFL_002353	DFL_007959	A0A437AAN0	A0A436ZXW3	Uncharacterized protein.	Uncharacterized protein.	0.604
DFL_002861	DFL_001122	A0A437ABP5	A0A437AG89	Uncharacterized protein.	Uncharacterized protein.	0.436
DFL_002861	DFL_002353	A0A437ABP5	A0A437AAN0	Uncharacterized protein.	Uncharacterized protein.	0.949
DFL_002861	DFL_007959	A0A437ABP5	A0A436ZXW3	Uncharacterized protein.	Uncharacterized protein.	0.556
DFL_003650	DFL_000477	A0A437A2F4	A0A437AFC1	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.	Uncharacterized protein.	0.475