Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_007959Uncharacterized protein. (457 aa)    
Predicted Functional Partners:
DFL_001122
Uncharacterized protein.
 
      0.898
DFL_004740
HECT domain-containing protein.
    
   0.894
DFL_002353
Uncharacterized protein.
    
 
 0.840
DFL_002288
AA_TRNA_LIGASE_II domain-containing protein.
    
 
 0.820
DFL_003650
Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
   
 
 0.748
DFL_002861
Uncharacterized protein.
    
 
 0.711
DFL_000939
Sfi1 domain-containing protein.
    
 
 0.682
DFL_000962
AA_TRNA_LIGASE_II domain-containing protein.
    
 
 0.682
DFL_003010
Uncharacterized protein.
      
 0.666
DFL_002796
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.657
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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