DFL_006183 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DFL_006183

Uncharacterized protein. (194 aa)

Predicted Functional Partners:

DFL_003915

0.976

DFL_001139

0.969

DFL_006210

0.918

DFL_001130

0.906

DFL_008167

0.897

DFL_003790

0.897

DFL_008876

0.880

DFL_002503

0.880

DFL_009139

0.872

DFL_008532

0.788

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_001130	DFL_001139	A0A437AG92	A0A437AGA4	Uncharacterized protein.	Uncharacterized protein.	0.735
DFL_001130	DFL_002503	A0A437AG92	A0A437AAN1	Uncharacterized protein.	Uncharacterized protein.	0.506
DFL_001130	DFL_003790	A0A437AG92	A0A437A2V0	Uncharacterized protein.	Uncharacterized protein.	0.631
DFL_001130	DFL_003915	A0A437AG92	A0A437A366	Uncharacterized protein.	Uncharacterized protein.	0.736
DFL_001130	DFL_006183	A0A437AG92	A0A436ZZN4	Uncharacterized protein.	Uncharacterized protein.	0.906
DFL_001130	DFL_006210	A0A437AG92	A0A436ZZL9	Uncharacterized protein.	Uncharacterized protein.	0.793
DFL_001130	DFL_008167	A0A437AG92	A0A436ZN26	Uncharacterized protein.	Uncharacterized protein.	0.622
DFL_001139	DFL_001130	A0A437AGA4	A0A437AG92	Uncharacterized protein.	Uncharacterized protein.	0.735
DFL_001139	DFL_002503	A0A437AGA4	A0A437AAN1	Uncharacterized protein.	Uncharacterized protein.	0.735
DFL_001139	DFL_003790	A0A437AGA4	A0A437A2V0	Uncharacterized protein.	Uncharacterized protein.	0.740
DFL_001139	DFL_003915	A0A437AGA4	A0A437A366	Uncharacterized protein.	Uncharacterized protein.	0.510
DFL_001139	DFL_006183	A0A437AGA4	A0A436ZZN4	Uncharacterized protein.	Uncharacterized protein.	0.969
DFL_001139	DFL_006210	A0A437AGA4	A0A436ZZL9	Uncharacterized protein.	Uncharacterized protein.	0.735
DFL_001139	DFL_008167	A0A437AGA4	A0A436ZN26	Uncharacterized protein.	Uncharacterized protein.	0.732
DFL_001139	DFL_008876	A0A437AGA4	A0A436ZQ31	Uncharacterized protein.	Uncharacterized protein.	0.725
DFL_002503	DFL_001130	A0A437AAN1	A0A437AG92	Uncharacterized protein.	Uncharacterized protein.	0.506
DFL_002503	DFL_001139	A0A437AAN1	A0A437AGA4	Uncharacterized protein.	Uncharacterized protein.	0.735
DFL_002503	DFL_003790	A0A437AAN1	A0A437A2V0	Uncharacterized protein.	Uncharacterized protein.	0.653
DFL_002503	DFL_003915	A0A437AAN1	A0A437A366	Uncharacterized protein.	Uncharacterized protein.	0.735
DFL_002503	DFL_006183	A0A437AAN1	A0A436ZZN4	Uncharacterized protein.	Uncharacterized protein.	0.880