DFL_006370 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DFL_006370

Pyr_redox_2 domain-containing protein. (384 aa)

Predicted Functional Partners:

DFL_000648

0.913

DFL_009668

0.867

DFL_004453

0.847

DFL_002220

0.760

DFL_003688

0.749

DFL_008202

0.726

DFL_000711

0.712

DFL_004773

0.699

DFL_009301

0.698

DFL_006663

0.698

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_000648	DFL_002220	A0A437AFI1	A0A437AA68	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.914
DFL_000648	DFL_004453	A0A437AFI1	A0A437A4Y7	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.950
DFL_000648	DFL_004773	A0A437AFI1	A0A437A5I4	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Lactamase_B domain-containing protein.	0.875
DFL_000648	DFL_006370	A0A437AFI1	A0A437A034	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Pyr_redox_2 domain-containing protein.	0.913
DFL_000648	DFL_008202	A0A437AFI1	A0A436ZN37	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.576
DFL_000648	DFL_009668	A0A437AFI1	A0A436ZSB6	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	2Fe-2S ferredoxin-type domain-containing protein.	0.958
DFL_000711	DFL_006370	A0A437AF61	A0A437A034	Clr5 domain-containing protein.	Pyr_redox_2 domain-containing protein.	0.712
DFL_000711	DFL_009668	A0A437AF61	A0A436ZSB6	Clr5 domain-containing protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.500
DFL_002220	DFL_000648	A0A437AA68	A0A437AFI1	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.914
DFL_002220	DFL_004453	A0A437AA68	A0A437A4Y7	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.914
DFL_002220	DFL_004773	A0A437AA68	A0A437A5I4	Uncharacterized protein.	Lactamase_B domain-containing protein.	0.906
DFL_002220	DFL_006370	A0A437AA68	A0A437A034	Uncharacterized protein.	Pyr_redox_2 domain-containing protein.	0.760
DFL_002220	DFL_009668	A0A437AA68	A0A436ZSB6	Uncharacterized protein.	2Fe-2S ferredoxin-type domain-containing protein.	0.739
DFL_003688	DFL_006370	A0A437A2K7	A0A437A034	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Pyr_redox_2 domain-containing protein.	0.749
DFL_003688	DFL_006663	A0A437A2K7	A0A436ZTJ8	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Stress-response A/B barrel domain-containing protein.	0.576
DFL_003688	DFL_008202	A0A437A2K7	A0A436ZN37	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.784
DFL_003688	DFL_009301	A0A437A2K7	A0A436ZR86	Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.	GFA domain-containing protein.	0.576
DFL_004453	DFL_000648	A0A437A4Y7	A0A437AFI1	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.950
DFL_004453	DFL_002220	A0A437A4Y7	A0A437AA68	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Uncharacterized protein.	0.914
DFL_004453	DFL_004773	A0A437A4Y7	A0A437A5I4	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	Lactamase_B domain-containing protein.	0.799