Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_006104DUF862 domain-containing protein. (271 aa)    
Predicted Functional Partners:
DFL_007091
VWFA domain-containing protein.
    
   0.712
DFL_008290
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.625
DFL_009422
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
    
   0.625
DFL_007149
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.625
DFL_007677
Proteasome subunit alpha type.
    
   0.625
DFL_007855
Proteasome subunit beta.
    
   0.625
DFL_006224
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.625
DFL_003632
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.625
DFL_002414
Proteasome subunit beta.
    
   0.625
DFL_002742
Proteasome subunit alpha type.
    
   0.625
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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