STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_003350DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (523 aa)    
Predicted Functional Partners:
DFL_006190
CPSF_A domain-containing protein.
    
 0.991
DFL_004772
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.949
DFL_007742
RING-type domain-containing protein.
    
 0.894
DFL_007957
WD_REPEATS_REGION domain-containing protein.
    
 0.876
DFL_004255
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.859
DFL_002787
Uncharacterized protein.
   
 0.838
DFL_001021
Uncharacterized protein.
   
 0.838
DFL_005907
RPA_C domain-containing protein.
    
 0.834
DFL_001265
Uncharacterized protein.
    
 0.834
DFL_001368
Stn1 domain-containing protein.
    
 0.834
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.