STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_004232XPA_C domain-containing protein. (353 aa)    
Predicted Functional Partners:
DFL_003521
Helicase ATP-binding domain-containing protein.
    
 0.986
DFL_008347
Uncharacterized protein.
    
 0.983
DFL_001835
ERCC4 domain-containing protein.
    
 0.980
DFL_005643
Uncharacterized protein.
    
 0.977
DFL_007375
Uncharacterized protein.
    
 0.973
DFL_006942
Uncharacterized protein.
    
 0.949
DFL_003209
Uncharacterized protein.
   
 0.947
DFL_008291
ERCC4 domain-containing protein.
    
 0.937
DFL_008560
General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family.
    
 0.930
DFL_004548
Uncharacterized protein.
    
 0.928
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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