Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DFL_004843Uncharacterized protein. (960 aa)    
Predicted Functional Partners:
DFL_006282
Uncharacterized protein.
   
   0.662
DFL_009673
WD_REPEATS_REGION domain-containing protein.
   
   0.660
DFL_003461
Uncharacterized protein.
   
   0.660
DFL_004719
Uncharacterized protein.
   
   0.655
DFL_009563
U3 small nucleolar RNA-associated protein 22.
   
   0.654
DFL_004554
Uncharacterized protein.
   
   0.654
DFL_003589
Uncharacterized protein.
   
   0.648
DFL_006824
WD_REPEATS_REGION domain-containing protein.
   
   0.647
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
   0.639
DFL_005101
Uncharacterized protein.
   
   0.639
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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