STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_001547Uncharacterized protein; Belongs to the DEAD box helicase family. (668 aa)    
Predicted Functional Partners:
DFL_005551
Sas10 domain-containing protein.
   
  0.901
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.899
DFL_009563
U3 small nucleolar RNA-associated protein 22.
   
  0.881
DFL_005050
Uncharacterized protein.
   
   0.880
DFL_007359
Uncharacterized protein.
   
 0.875
DFL_004916
Uncharacterized protein.
  
0.870
DFL_001634
BP28CT domain-containing protein.
   
  0.842
DFL_008169
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
   
 
 0.839
DFL_008660
Rsa3 domain-containing protein.
   
 
 0.839
DFL_008568
Urb2 domain-containing protein.
   
 
 0.838
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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