DFL_001793 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DFL_001793

HMA domain-containing protein. (241 aa)

Predicted Functional Partners:

DFL_006877

0.998

DFL_005675

0.969

DFL_008273

0.935

DFL_008802

0.935

DFL_006147

0.935

DFL_005184

0.935

DFL_001795

0.768

DFL_008202

0.674

DFL_008775

0.674

DFL_003743

0.674

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_001793	DFL_001795	A0A437A8W7	A0A437A8M4	HMA domain-containing protein.	Uncharacterized protein.	0.768
DFL_001793	DFL_003743	A0A437A8W7	A0A437A2W1	HMA domain-containing protein.	Uncharacterized protein.	0.674
DFL_001793	DFL_005184	A0A437A8W7	A0A437A703	HMA domain-containing protein.	Uncharacterized protein.	0.935
DFL_001793	DFL_005675	A0A437A8W7	A0A436ZYV9	HMA domain-containing protein.	Sod_Cu domain-containing protein.	0.969
DFL_001793	DFL_006147	A0A437A8W7	A0A436ZZF7	HMA domain-containing protein.	HMA domain-containing protein.	0.935
DFL_001793	DFL_006877	A0A437A8W7	A0A436ZU18	HMA domain-containing protein.	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	0.998
DFL_001793	DFL_008202	A0A437A8W7	A0A436ZN37	HMA domain-containing protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.674
DFL_001793	DFL_008273	A0A437A8W7	A0A436ZND7	HMA domain-containing protein.	Uncharacterized protein.	0.935
DFL_001793	DFL_008775	A0A437A8W7	A0A436ZPR7	HMA domain-containing protein.	Dihydrolipoyl dehydrogenase.	0.674
DFL_001793	DFL_008802	A0A437A8W7	A0A436ZPU8	HMA domain-containing protein.	HMA domain-containing protein.	0.935
DFL_001795	DFL_001793	A0A437A8M4	A0A437A8W7	Uncharacterized protein.	HMA domain-containing protein.	0.768
DFL_003743	DFL_001793	A0A437A2W1	A0A437A8W7	Uncharacterized protein.	HMA domain-containing protein.	0.674
DFL_005184	DFL_001793	A0A437A703	A0A437A8W7	Uncharacterized protein.	HMA domain-containing protein.	0.935
DFL_005184	DFL_005675	A0A437A703	A0A436ZYV9	Uncharacterized protein.	Sod_Cu domain-containing protein.	0.460
DFL_005184	DFL_006877	A0A437A703	A0A436ZU18	Uncharacterized protein.	Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.	0.510
DFL_005675	DFL_001793	A0A436ZYV9	A0A437A8W7	Sod_Cu domain-containing protein.	HMA domain-containing protein.	0.969
DFL_005675	DFL_005184	A0A436ZYV9	A0A437A703	Sod_Cu domain-containing protein.	Uncharacterized protein.	0.460
DFL_005675	DFL_006147	A0A436ZYV9	A0A436ZZF7	Sod_Cu domain-containing protein.	HMA domain-containing protein.	0.460
DFL_005675	DFL_008202	A0A436ZYV9	A0A436ZN37	Sod_Cu domain-containing protein.	Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.	0.415
DFL_005675	DFL_008273	A0A436ZYV9	A0A436ZND7	Sod_Cu domain-containing protein.	Uncharacterized protein.	0.460