STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_002592Ubiquitin-like domain-containing protein. (234 aa)    
Predicted Functional Partners:
DFL_004740
HECT domain-containing protein.
   
 0.995
DFL_008439
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.991
DFL_002858
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.974
DFL_006617
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.973
DFL_001090
Uncharacterized protein.
   
 0.972
DFL_005032
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.971
DFL_001609
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.971
DFL_001765
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.971
DFL_001214
40S ribosomal protein S27.
   
 0.971
DFL_008679
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.970
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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