STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFL_002977Uncharacterized protein. (349 aa)    
Predicted Functional Partners:
DFL_001020
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.943
DFL_007099
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
   
 
 0.927
DFL_002419
TPR_REGION domain-containing protein.
   
 
 0.926
DFL_006388
EMC1_C domain-containing protein.
    
 
 0.920
DFL_009611
DUF2012 domain-containing protein.
    
 
 0.851
DFL_005479
Uncharacterized protein.
   
 
 0.842
DFL_006017
Uncharacterized protein.
    
 
 0.778
DFL_006846
Uncharacterized protein.
   
    0.529
DFL_009701
Plug_translocon domain-containing protein.
    
 
 0.415
DFL_008302
zf-CHCC domain-containing protein.
   
    0.404
Your Current Organism:
Arthrobotrys flagrans
NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans
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