DFL_002606 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DFL_002606

Uncharacterized protein; Belongs to the cytochrome P450 family. (580 aa)

Predicted Functional Partners:

DFL_000648

0.843

DFL_008373

0.655

DFL_001211

0.655

DFL_000386

0.653

DFL_004291

0.652

DFL_006497

0.646

DFL_000192

0.645

DFL_000731

0.635

DFL_007058

0.625

DFL_007648

0.618

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_000192	DFL_000386	A0A437AD83	A0A437ADT2	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.502
DFL_000192	DFL_000731	A0A437AD83	A0A437AF17	Uncharacterized protein.	Uncharacterized protein.	0.502
DFL_000192	DFL_001211	A0A437AD83	A0A437AGG3	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.502
DFL_000192	DFL_002606	A0A437AD83	A0A437AC81	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.645
DFL_000192	DFL_004291	A0A437AD83	A0A437A4E3	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.502
DFL_000192	DFL_006497	A0A437AD83	A0A437A149	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.502
DFL_000192	DFL_007058	A0A437AD83	A0A436ZUP6	Uncharacterized protein.	Uncharacterized protein.	0.970
DFL_000192	DFL_007648	A0A437AD83	A0A436ZX37	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.697
DFL_000192	DFL_008373	A0A437AD83	A0A436ZNP8	Uncharacterized protein.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.649
DFL_000386	DFL_000192	A0A437ADT2	A0A437AD83	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.502
DFL_000386	DFL_000648	A0A437ADT2	A0A437AFI1	Uncharacterized protein; Belongs to the cytochrome P450 family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.835
DFL_000386	DFL_000731	A0A437ADT2	A0A437AF17	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.473
DFL_000386	DFL_002606	A0A437ADT2	A0A437AC81	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.653
DFL_000386	DFL_007058	A0A437ADT2	A0A436ZUP6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.416
DFL_000386	DFL_007648	A0A437ADT2	A0A436ZX37	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.672
DFL_000386	DFL_008373	A0A437ADT2	A0A436ZNP8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.	0.563
DFL_000648	DFL_000386	A0A437AFI1	A0A437ADT2	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.835
DFL_000648	DFL_000731	A0A437AFI1	A0A437AF17	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.841
DFL_000648	DFL_001211	A0A437AFI1	A0A437AGG3	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.835
DFL_000648	DFL_002606	A0A437AFI1	A0A437AC81	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.843