DFL_002894 protein (Arthrobotrys flagrans) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DFL_002894

MIT domain-containing protein. (1186 aa)

Predicted Functional Partners:

DFL_008153

0.855

DFL_004825

0.854

DFL_009586

0.852

DFL_002331

0.843

DFL_005983

0.841

DFL_001081

0.825

DFL_002227

0.820

DFL_006846

0.817

DFL_008155

0.813

DFL_000984

0.812

Your Current Organism:

Arthrobotrys flagrans

NCBI taxonomy Id: 97331
Other names: A. flagrans, Duddingtonia flagrans, Trichothecium flagrans

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DFL_000984	DFL_001081	A0A437AFU4	A0A437AG48	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_000984	DFL_002227	A0A437AFU4	A0A437AAC0	Uncharacterized protein.	Uncharacterized protein.	0.997
DFL_000984	DFL_002331	A0A437AFU4	A0A437AA49	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.998
DFL_000984	DFL_002894	A0A437AFU4	A0A437ACA6	Uncharacterized protein.	MIT domain-containing protein.	0.812
DFL_000984	DFL_004825	A0A437AFU4	A0A437A631	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_000984	DFL_005983	A0A437AFU4	A0A436ZYW6	Uncharacterized protein.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.999
DFL_000984	DFL_006846	A0A437AFU4	A0A436ZU07	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_000984	DFL_008153	A0A437AFU4	A0A436ZN30	Uncharacterized protein.	Uncharacterized protein.	0.998
DFL_000984	DFL_008155	A0A437AFU4	A0A436ZMY8	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.999
DFL_000984	DFL_009586	A0A437AFU4	A0A436ZS34	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.999
DFL_001081	DFL_000984	A0A437AG48	A0A437AFU4	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_001081	DFL_002227	A0A437AG48	A0A437AAC0	Uncharacterized protein.	Uncharacterized protein.	0.998
DFL_001081	DFL_002331	A0A437AG48	A0A437AA49	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
DFL_001081	DFL_002894	A0A437AG48	A0A437ACA6	Uncharacterized protein.	MIT domain-containing protein.	0.825
DFL_001081	DFL_004825	A0A437AG48	A0A437A631	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_001081	DFL_005983	A0A437AG48	A0A436ZYW6	Uncharacterized protein.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.999
DFL_001081	DFL_006846	A0A437AG48	A0A436ZU07	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_001081	DFL_008153	A0A437AG48	A0A436ZN30	Uncharacterized protein.	Uncharacterized protein.	0.999
DFL_001081	DFL_008155	A0A437AG48	A0A436ZMY8	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.	0.999
DFL_001081	DFL_009586	A0A437AG48	A0A436ZS34	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.999