A0A550BTY4 protein (Auriculariopsis ampla) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A550BTY4

Kinase-like domain-containing protein. (970 aa)

Predicted Functional Partners:

A0A550BRF2

0.871

A0A550CLP7

0.871

A0A550CXV4

0.867

A0A550CTI2

0.861

A0A550CTJ6

0.861

A0A550BTK3

0.832

A0A550C503

0.832

A0A550C9M8

0.832

A0A550CKE2

0.832

A0A550CN19

0.832

Your Current Organism:

Auriculariopsis ampla

NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A550BRF2	A0A550BTK3	Uncharacterized protein.	Small GTPase-binding protein.	0.993
A0A550BRF2	A0A550BTY4	Uncharacterized protein.	Kinase-like domain-containing protein.	0.871
A0A550BRF2	A0A550C503	Uncharacterized protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.993
A0A550BRF2	A0A550CKE2	Uncharacterized protein.	Small GTPase Rho3/GTP-binding protein Rho3.	0.993
A0A550BRF2	A0A550CLP7	Uncharacterized protein.	Uncharacterized protein.	0.509
A0A550BRF2	A0A550CN19	Uncharacterized protein.	Uncharacterized protein.	0.993
A0A550BRF2	A0A550CTI2	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.562
A0A550BRF2	A0A550CTJ6	Uncharacterized protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.562
A0A550BRF2	A0A550CXV4	Uncharacterized protein.	Uncharacterized protein.	0.858
A0A550BTK3	A0A550BRF2	Small GTPase-binding protein.	Uncharacterized protein.	0.993
A0A550BTK3	A0A550BTY4	Small GTPase-binding protein.	Kinase-like domain-containing protein.	0.832
A0A550BTK3	A0A550C503	Small GTPase-binding protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.823
A0A550BTK3	A0A550CKE2	Small GTPase-binding protein.	Small GTPase Rho3/GTP-binding protein Rho3.	0.747
A0A550BTK3	A0A550CLP7	Small GTPase-binding protein.	Uncharacterized protein.	0.993
A0A550BTK3	A0A550CN19	Small GTPase-binding protein.	Uncharacterized protein.	0.819
A0A550BTK3	A0A550CTI2	Small GTPase-binding protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.674
A0A550BTK3	A0A550CTJ6	Small GTPase-binding protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.674
A0A550BTK3	A0A550CXV4	Small GTPase-binding protein.	Uncharacterized protein.	0.999
A0A550BTY4	A0A550BRF2	Kinase-like domain-containing protein.	Uncharacterized protein.	0.871
A0A550BTY4	A0A550BTK3	Kinase-like domain-containing protein.	Small GTPase-binding protein.	0.832