STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550BUG1U3 small nucleolar RNA-associated protein 6-domain-containing protein. (387 aa)    
Predicted Functional Partners:
A0A550CCQ1
Utp21 specific WD40 associated putative domain-containing protein.
   
 0.993
A0A550CTC5
WD40-repeat-containing domain protein.
   
 0.993
A0A550CFP1
WD40-repeat-containing domain protein.
   
 0.992
A0A550CDD4
WD40-repeat-containing domain protein.
   
 0.991
A0A550CMP9
Quinon protein alcohol dehydrogenase-like superfamily.
   
 0.990
A0A550CN76
WD40-repeat-containing domain protein.
   
 0.990
A0A550C9F6
WD40-repeat-containing domain protein.
   
 0.988
A0A550D0H2
U3 small nucleolar RNA-associated protein 22.
   
 0.988
A0A550CC74
WD40-repeat-containing domain protein.
   
 0.984
A0A550CER9
BP28CT domain-containing protein.
   
 0.984
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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