STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550BVB4PHD domain-containing protein. (782 aa)    
Predicted Functional Partners:
A0A550CH14
Mob1/phocein.
    
 0.660
A0A550CH28
Mob1/phocein.
    
 0.660
A0A550CTF8
Mob1/phocein.
    
 0.660
A0A550CHD0
Serine/threonine-protein phosphatase.
    
  0.643
A0A550CHG6
Uncharacterized protein.
    
  0.643
A0A550CJ00
Metallo-dependent phosphatase-like protein.
    
  0.643
A0A550C5A0
Uncharacterized protein.
    
  0.584
A0A550CEX5
Uncharacterized protein.
    
  0.584
A0A550CLT6
Uncharacterized protein.
    
  0.584
A0A550C3P0
WD40-repeat-containing domain protein.
    
 
 0.499
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.