STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550BVC6Helitron_like_N domain-containing protein. (293 aa)    
Predicted Functional Partners:
A0A550CBN7
Mad3/BUB1 homology region 1-domain-containing protein.
   
 0.669
A0A550CIR4
Uncharacterized protein.
   
 0.669
A0A550C1N4
Peptidase family C50-domain-containing protein.
   
 
  0.637
A0A550CLR8
NUDE_C domain-containing protein.
    
 0.551
A0A550CAA9
HEC/Ndc80p family-domain-containing protein.
   
  
 0.520
A0A550BVC9
Helitron_like_N domain-containing protein.
 
     0.504
A0A550CCH3
Kinesin 2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.499
A0A550BZL0
Helitron_like_N domain-containing protein.
  
     0.490
A0A550CBL6
Helitron_like_N domain-containing protein.
 
     0.438
PAC1
Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family.
    
  0.435
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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