STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550BZL4Helitron_like_N domain-containing protein. (286 aa)    
Predicted Functional Partners:
A0A550C1N4
Peptidase family C50-domain-containing protein.
   
 
 0.684
A0A550CBN7
Mad3/BUB1 homology region 1-domain-containing protein.
   
 
 0.541
A0A550CIR4
Uncharacterized protein.
   
 
 0.541
A0A550C609
Spindle assembly checkpoint protein.
   
 
  0.521
A0A550CFA3
Serine/threonine-protein kinase.
   
 
  0.510
A0A550CGV6
Kinase-like domain-containing protein.
   
 
  0.510
A0A550BVC9
Helitron_like_N domain-containing protein.
 
     0.509
A0A550BT34
WD40-repeat-containing domain protein.
   
 
 0.498
A0A550CV21
WD40-repeat-containing domain protein.
   
 
 0.498
A0A550CVQ9
WD40-repeat-containing domain protein.
   
 
 0.498
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.