STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550C044NADP-dependent oxidoreductase domain-containing protein. (322 aa)    
Predicted Functional Partners:
A0A550C7M0
Tryptophan synthase.
     
 0.628
A0A550CX20
Uncharacterized protein.
   
 0.560
A0A550CPR6
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.555
A0A550CP00
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.538
A0A550C2J7
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
    
 0.485
A0A550CKW8
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.484
A0A550BZG3
Ion_trans domain-containing protein.
    
 0.462
A0A550CHR5
Uncharacterized protein.
    
  0.456
A0A550CLT2
Nuclear protein 96-domain-containing protein.
    
  0.456
A0A550CSV6
Nucleoporin autopeptidase-domain-containing protein.
    
  0.456
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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