STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550C047Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. (327 aa)    
Predicted Functional Partners:
A0A550CMX3
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
 
 0.978
A0A550CMU1
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
 0.962
A0A550CT04
Uncharacterized protein.
  
 
 0.896
A0A550BY70
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.891
A0A550C1N6
Formate--tetrahydrofolate ligase-domain-containing protein.
  
 0.824
A0A550C4T1
Dihydrolipoyl dehydrogenase.
  
 0.802
A0A550CK85
Pyridoxal phosphate-dependent transferase.
  
 
 0.796
A0A550CL00
Cytidine deaminase-like protein.
   
 
 0.793
A0A550CH55
Formyl transferase.
   
 
 0.761
A0A550C3J6
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.755
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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