STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550C196WD40-repeat-containing domain protein. (760 aa)    
Predicted Functional Partners:
A0A550C3J2
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.910
A0A550CSQ8
Spindle pole body component.
    
 0.892
A0A550CMR5
Spindle pole body component.
    
 0.881
A0A550C9X2
DASH complex subunit Ask1-domain-containing protein.
    
 0.842
A0A550CSP3
Spindle pole body component.
    
 0.842
A0A550CX55
Spindle pole body component.
    
 0.842
A0A550BTV7
Spindle pole body component.
    
 0.831
A0A550CFA3
Serine/threonine-protein kinase.
    
 0.721
A0A550CGV6
Kinase-like domain-containing protein.
    
 0.721
A0A550CSM1
RRM domain-containing protein.
     
 0.701
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.