STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550C511Tautomerase/MIF superfamily. (116 aa)    
Predicted Functional Partners:
A0A550CAR3
Aspartate aminotransferase.
     
 0.792
A0A550CMW6
Aspartate aminotransferase.
   
 
 0.778
A0A550C6C6
Pyridoxal phosphate-dependent transferase.
     
  0.768
A0A550C466
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
    
 
 0.767
A0A550CTH3
Pyridoxal phosphate-dependent transferase.
     
  0.762
A0A550C2G3
PlsC domain-containing protein.
   
 0.747
A0A550CW34
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.747
A0A550CSF7
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
   0.607
A0A550BS91
Uncharacterized protein.
     
  0.596
PAC1
Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family.
     
  0.596
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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