STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550C577Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (83 aa)    
Predicted Functional Partners:
A0A550CMR8
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.963
A0A550CQF3
RING-type domain-containing protein.
    
 0.961
A0A550CRK7
Ubiquitin-related domain-containing protein.
    
 0.911
A0A550CNG7
Cullin; Belongs to the cullin family.
    
 0.908
A0A550CGP8
Cullin; Belongs to the cullin family.
    
 0.868
A0A550CHB5
Cullin; Belongs to the cullin family.
    
 0.868
A0A550CRR0
Cullin; Belongs to the cullin family.
    
 0.868
A0A550BYZ5
Armadillo-type protein.
    
 0.848
A0A550C466
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
   
 0.842
A0A550CCL1
Non-catalytic module family EXPN protein.
   
 0.740
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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