STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550C899TRAPP complex subunit trs33. (245 aa)    
Predicted Functional Partners:
A0A550CD81
Trafficking protein particle complex subunit BET3.
   
 0.997
A0A550CS42
Sedlin, N-terminal conserved region-domain-containing protein.
   
 0.997
A0A550CYP2
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.997
A0A550C1B5
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.996
A0A550CDQ2
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.995
A0A550CNP8
ER-golgi trafficking TRAPP I complex 85 kDa subunit-domain-containing protein.
   
 0.995
A0A550CUC5
Sedlin.
   
 0.994
A0A550CAP1
Trafficking protein particle complex subunit 10.
    
 0.991
A0A550CCI2
TRAPP II complex.
   
 0.991
A0A550CW81
Gryzun, putative trafficking through golgi-domain-containing protein.
   
 0.988
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.