STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CAP3ABM domain-containing protein. (113 aa)    
Predicted Functional Partners:
A0A550CA06
THO complex subunit 1 transcription elongation factor-domain-containing protein.
    
 0.957
A0A550CS70
Tho complex subunit 7-domain-containing protein.
   
 0.937
A0A550BUM0
Uncharacterized protein.
   
 0.854
A0A550CDK2
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.854
A0A550CMP4
Uncharacterized protein.
   
 0.854
A0A550CFI5
RRM domain-containing protein.
   
 0.827
A0A550CFP4
RRM domain-containing protein.
   
 0.827
A0A550CFZ3
RRM domain-containing protein.
   
 0.827
A0A550CJG2
Mago nashi protein.
   
  0.817
A0A550CRX2
Fms-interacting protein-domain-containing protein.
    
 0.813
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.