STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CAP8rRNA-processing arch domain-containing protein. (1017 aa)    
Predicted Functional Partners:
A0A550CTC5
WD40-repeat-containing domain protein.
   
 0.996
A0A550C8U6
Bms1-type G domain-containing protein.
   
 0.994
A0A550CRM5
Utp14 protein-domain-containing protein.
   
 0.994
A0A550CUS8
Bystin-domain-containing protein.
   
 
 0.994
A0A550CP69
Ribosomal protein S5 domain 2-type protein.
   
 0.993
A0A550C2H8
Ribosomal protein S5 domain 2-type protein.
   
 0.992
A0A550CLS7
EXOSC1 domain-containing protein.
   
 0.992
A0A550CMB4
Uncharacterized protein.
   
 0.992
A0A550CH11
Uncharacterized protein.
   
 0.991
A0A550CM01
Sas10/Utp3/C1D family-domain-containing protein.
   
 0.991
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.