STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CB35Chitin-binding type-4 domain-containing protein. (440 aa)    
Predicted Functional Partners:
A0A550CUA9
Actin family; Belongs to the actin family.
    
 0.800
A0A550CED6
Uncharacterized protein.
    
 0.797
A0A550C740
Uncharacterized protein.
    
 0.787
A0A550CPW2
Uncharacterized protein.
    
 0.751
A0A550CBI5
Uncharacterized protein.
    
 0.746
A0A550CGD9
Uncharacterized protein.
    
 0.746
A0A550CWG4
SWIB/MDM2 domain-containing protein.
    
 0.743
A0A550C1P0
Uncharacterized protein.
    
 0.737
A0A550CMM9
Uncharacterized protein.
    
 0.737
A0A550CJM9
RRM domain-containing protein.
    
  0.697
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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