STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CBS3DUF667 domain-containing protein. (257 aa)    
Predicted Functional Partners:
A0A550CBQ4
Uncharacterized protein.
    
 
 0.894
A0A550D0F6
Ca2+-binding EF-hand superfamily protein.
    
 
 0.884
A0A550C8Y4
Robl_LC7 domain-containing protein.
    
   0.869
A0A550C7I7
Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
    
   0.866
A0A550BTX4
Mu homology domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 
 0.865
A0A550BUE1
NDK domain-containing protein.
    
 
 0.859
A0A550CA82
Nucleoside diphosphate kinase.
    
 
 0.859
A0A550CAG8
CRM1 C terminal-domain-containing protein.
    
   0.855
A0A550CTZ2
Uncharacterized protein.
    
   0.855
A0A550CFP0
Succinate dehydrogenase assembly factor 2, mitochondrial; Plays an essential role in the assembly of succinate dehydrogenase (SDH), an enzyme complex (also referred to as respiratory complex II) that is a component of both the tricarboxylic acid (TCA) cycle and the mitochondrial electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit of the SDH catalytic dimer.
    
   0.853
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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