STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A550CBS7GRASP55/65 PDZ-like domain-containing protein. (314 aa)    
Predicted Functional Partners:
A0A550CFZ7
Sec23/Sec24 trunk domain-containing protein.
   
 0.980
A0A550CD37
Small GTP-binding protein.
    
 0.976
A0A550CFD7
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.974
A0A550CVL2
P115 like vesicle tethering protein.
   
 0.965
A0A550CWK4
Cornichon.
   
 0.960
A0A550CFA3
Serine/threonine-protein kinase.
   
 0.916
A0A550CUF5
Emp24/gp25L/p24 family/GOLD-domain-containing protein.
   
  0.874
A0A550CM95
t-SNARE.
    
 0.860
A0A550C9A6
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.859
A0A550CMT7
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.857
Your Current Organism:
Auriculariopsis ampla
NCBI taxonomy Id: 97359
Other names: A. ampla, Schizophyllum amplum
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